C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12271
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121719 Gm12271-001 ENSMUSG00000082032 10090 - 11:61416402-61416815 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverPlacentaENSMUST00000121719
Transcript ID Bladder Brain Liver Placenta
ENSMUST00000121719 0.097±0.07 0.074±0.03 0.063±0.03 0.179±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230495 H3F3AP6-001 processed_pseudogene Homo_sapiens 0 529
ENST00000321285 RP11-402J6.3-001 processed_pseudogene Homo_sapiens 0 508
ENST00000366813 H3F3A-002 protein_coding Homo_sapiens 0 529
ENST00000366814 H3F3A-003 protein_coding Homo_sapiens 0 351
ENST00000366815 H3F3A-001 protein_coding Homo_sapiens 0 529
ENST00000366816 H3F3A-004 protein_coding Homo_sapiens 0 529
ENST00000369387 H3F3AP4-001 processed_pseudogene Homo_sapiens 0 529
ENST00000404612 HIST1H3PS1-001 processed_pseudogene Homo_sapiens 0 442
ENST00000416267 RP11-349N19.2-001 processed_pseudogene Homo_sapiens 0 479
ENST00000416765 RP1-22N22.1-001 processed_pseudogene Homo_sapiens 0 449
ENST00000421430 RP11-4M23.4-001 processed_pseudogene Homo_sapiens 0 416
ENST00000429959 RP11-330C7.4-001 processed_pseudogene Homo_sapiens 1e-24 115
ENST00000440551 H3F3BP1-001 processed_pseudogene Homo_sapiens 0 486
ENST00000475267 H3F3AP5-001 processed_pseudogene Homo_sapiens 0 464
ENST00000496255 RP11-473P24.2-001 processed_pseudogene Homo_sapiens 0 399
ENST00000497682 H3F3AP3-001 processed_pseudogene Homo_sapiens 0 440
ENST00000505098 CTC-505O3.1-001 processed_pseudogene Homo_sapiens 0 448
ENST00000509149 CTC-470C15.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000532005 RP11-745I13.1-001 processed_pseudogene Homo_sapiens 0 243
ENST00000557753 RP11-452K20.1-001 processed_pseudogene Homo_sapiens 0 313
ENST00000559063 CTD-2651B20.2-001 processed_pseudogene Homo_sapiens 0 381

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