C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533186 RPS2-013 ENSG00000140988 9606 - 16:1962061-1964356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000533186
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000533186 212.162±0.00 12.571±0.00 35.740±0.00 48.423±0.00 101.415±0.00 11.800±0.00 27.160±0.00 88.498±0.00 50.318±0.00 117.651±0.00 264.867±145.65 474.662±120.26 87.229±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0015935 IEA small ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170335 Rps2-ps10-002 processed_transcript Mus_musculus 0 671
ENSMUST00000095471 Rps2-ps6-201 protein_coding Mus_musculus 0 641
ENSMUST00000117071 Gm11249-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000118911 Gm11687-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000117295 Rps2-ps13-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000079261 Gm6139-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000076842 Rps2-ps10-001 transcribed_processed_pseudogene Mus_musculus 0 632
ENSMUST00000184266 Rps2-ps5-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000118720 Gm11599-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000073790 Gm6311-201 pseudogene Mus_musculus 0 621
ENSMUST00000075898 Gm5921-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000085368 Gm5786-201 protein_coding Mus_musculus 0 619
ENSMUST00000177599 Gm5070-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000169678 Gm6576-201 protein_coding Mus_musculus 0 603
ENSMUST00000121722 Gm12366-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000071458 Gm4968-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000117512 Gm7222-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000166546 Gm18025-201 protein_coding Mus_musculus 0 575
ENSMUST00000146791 Gm12091-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000118634 Gm6433-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000121348 Gm7638-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000122167 Gm16061-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000165577 Gm17150-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000116032 Gm16073-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000122465 Gm12152-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 2e-23 113
ENSDART00000133878 rps2-003 retained_intron Danio_rerio 0.0000000000002 81
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0.0000000000006 79
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0.0000000000006 79
ENSDART00000141100 rps2-002 protein_coding Danio_rerio 0.0000000000006 79

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