C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000459634 RP11-192C21.1-001 ENSG00000241411 9606 - 4:134952259-134952889 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000459634
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000459634 0.146±0.00 0.268±0.00 0.168±0.00 0.113±0.00 0.036±0.00 0.121±0.00 0.412±0.00 0.495±0.00 0.087±0.03 0.218±0.00 0.036±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079261 Gm6139-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000076842 Rps2-ps10-001 transcribed_processed_pseudogene Mus_musculus 0 706
ENSMUST00000170335 Rps2-ps10-002 processed_transcript Mus_musculus 0 706
ENSMUST00000118911 Gm11687-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000117295 Rps2-ps13-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000117071 Gm11249-001 processed_pseudogene Mus_musculus 0 697
ENSMUST00000085368 Gm5786-201 protein_coding Mus_musculus 0 697
ENSMUST00000095471 Rps2-ps6-201 protein_coding Mus_musculus 0 678
ENSMUST00000177599 Gm5070-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000118720 Gm11599-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000075898 Gm5921-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000169678 Gm6576-201 protein_coding Mus_musculus 0 673
ENSMUST00000184266 Rps2-ps5-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000121722 Gm12366-001 processed_pseudogene Mus_musculus 0 660
ENSMUST00000073790 Gm6311-201 pseudogene Mus_musculus 0 660
ENSMUST00000166546 Gm18025-201 protein_coding Mus_musculus 0 652
ENSMUST00000071458 Gm4968-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000146791 Gm12091-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000118634 Gm6433-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000122167 Gm16061-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000117512 Gm7222-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 553
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 521
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 521
ENSMUST00000183369 Gm18014-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000121348 Gm7638-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000116032 Gm16073-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000165577 Gm17150-001 processed_pseudogene Mus_musculus 0 331
ENSDART00000141100 rps2-002 protein_coding Danio_rerio 1e-25 121
ENSDART00000133878 rps2-003 retained_intron Danio_rerio 0.00000000003 73

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