C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452821 RP11-170M17.2-001 ENSG00000213609 9606 - 10:63902451-63903245 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000452821
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000452821 0.285±0.00 0.116±0.00 0.139±0.00 0.457±0.00 0.109±0.00 0.024±0.00 0.107±0.00 0.091±0.00 0.075±0.00 0.057±0.02 0.070±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085365 Gm16477-001 processed_pseudogene Mus_musculus 0 826
ENSMUST00000090170 Rpl7a-ps3-201 protein_coding Mus_musculus 0 824
ENSMUST00000118791 Rpl7a-ps11-001 processed_pseudogene Mus_musculus 0 821
ENSMUST00000190511 RP23-58N8.1-001 processed_pseudogene Mus_musculus 0 821
ENSMUST00000102898 Rpl7a-001 protein_coding Mus_musculus 0 815
ENSMUST00000190579 Rpl7a-ps10-001 processed_pseudogene Mus_musculus 0 798
ENSMUST00000183380 Gm17828-001 processed_pseudogene Mus_musculus 0 793
ENSMUST00000095218 Rpl7a-ps5-201 protein_coding Mus_musculus 0 787
ENSMUST00000071172 RP23-58N8.4-001 processed_pseudogene Mus_musculus 0 771
ENSMUST00000096427 Gm17415-001 processed_pseudogene Mus_musculus 0 771
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000145247 Gm6286-001 processed_pseudogene Mus_musculus 0 765
ENSMUST00000189720 RP23-321G17.2-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000162120 Gm7418-001 processed_pseudogene Mus_musculus 0 743
ENSMUST00000119745 Gm13864-001 processed_pseudogene Mus_musculus 0 728
ENSMUST00000120032 Gm13666-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000120384 Rpl7a-ps12-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000151645 Gm7847-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000119589 Gm16071-001 processed_pseudogene Mus_musculus 0 699
ENSMUST00000171235 Gm5459-001 processed_pseudogene Mus_musculus 0 699
ENSMUST00000117398 Gm8250-001 processed_pseudogene Mus_musculus 0 697
ENSMUST00000136269 Rpl7a-002 processed_transcript Mus_musculus 0 689
ENSMUST00000122355 Gm11760-001 processed_pseudogene Mus_musculus 0 678
ENSMUST00000139800 Gm5353-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000137376 Rpl7a-004 processed_transcript Mus_musculus 0 649
ENSMUST00000118838 Gm11362-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000118766 Gm16198-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000118615 Gm13183-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000120981 Gm12593-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000143678 Rpl7a-003 processed_transcript Mus_musculus 0 440
ENSMUST00000117289 Gm16394-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000166414 Gm17097-001 processed_pseudogene Mus_musculus 8e-28 128
ENSMUST00000119982 Gm15007-001 processed_pseudogene Mus_musculus 0.000000006 66

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