C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12261
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117499 Gm12261-001 ENSMUSG00000081262 10090 - 11:59577992-59578636 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaENSMUST00000117499
Transcript ID Bladder Brain Liver Ovary Placenta
ENSMUST00000117499 0.436±0.00 0.394±0.06 0.342±0.25 0.036±0.00 0.078±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255320 HMGB1P5-001 transcribed_processed_pseudogene Homo_sapiens 0 614
ENST00000326004 HMGB1-003 protein_coding Homo_sapiens 0 468
ENST00000339872 HMGB1-001 protein_coding Homo_sapiens 0 625
ENST00000341423 HMGB1-004 protein_coding Homo_sapiens 0 625
ENST00000395823 HMGB1P10-001 processed_pseudogene Homo_sapiens 0 527
ENST00000399489 HMGB1-009 protein_coding Homo_sapiens 0 468
ENST00000399494 HMGB1-011 protein_coding Homo_sapiens 0 625
ENST00000402555 HMGB1P20-001 processed_pseudogene Homo_sapiens 0 355
ENST00000405805 HMGB1-012 protein_coding Homo_sapiens 0 625
ENST00000406019 HMGB1P13-001 processed_pseudogene Homo_sapiens 0 427
ENST00000413899 HMGB1P11-001 processed_pseudogene Homo_sapiens 0 484
ENST00000437242 HMGB1P31-001 processed_pseudogene Homo_sapiens 0 254
ENST00000438594 HMGB1P12-001 processed_pseudogene Homo_sapiens 0 315
ENST00000439613 HMGB1P37-001 processed_pseudogene Homo_sapiens 0 462
ENST00000447155 HMGB1P16-001 processed_pseudogene Homo_sapiens 0 388
ENST00000451497 HMGB1P5-002 processed_transcript Homo_sapiens 0 436
ENST00000452520 HMGB1P26-001 processed_pseudogene Homo_sapiens 0 424
ENST00000459868 FMO1-004 processed_transcript Homo_sapiens 0 206
ENST00000487709 HMGB1P36-001 processed_pseudogene Homo_sapiens 0 237
ENST00000522557 HMGB1P1-001 processed_pseudogene Homo_sapiens 0 582
ENST00000558211 HMGB1P8-001 processed_pseudogene Homo_sapiens 0 215
ENST00000569046 RP11-673C5.1-001 processed_pseudogene Homo_sapiens 0 582
ENST00000611897 RP11-19G24.3-002 processed_transcript Homo_sapiens 1.00053e-42 176
ENST00000615653 RP11-19G24.3-001 transcribed_processed_pseudogene Homo_sapiens 0 457

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