C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: flavin containing monooxygenase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000459868 FMO1-004 ENSG00000010932 9606 + 1:171258090-171271621 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungOvaryENST00000459868
Transcript ID Breast Lung Ovary
ENST00000459868 1.562±0.00 0.100±0.00 0.334±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X5 CIL_0007X5_0001 VISTA 1:170981906-171584837
CIL_000285 CIL_000285_0005 CGP 1:171185208-171285978
CIL_000285 CIL_000285_0004 CGP 1:171248471-171342084

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111518 Fmo1-002 protein_coding Mus_musculus 0 364
ENSMUST00000131058 Fmo1-004 protein_coding Mus_musculus 0 364
ENSMUST00000134098 Fmo1-003 protein_coding Mus_musculus 0 364
ENSMUST00000046049 Fmo1-001 protein_coding Mus_musculus 0 364
ENSMUST00000178049 Gm21596-201 processed_pseudogene Mus_musculus 0 244
ENSMUST00000125605 Hmgb1-008 protein_coding Mus_musculus 0 244
ENSMUST00000133667 Hmgb1-004 retained_intron Mus_musculus 0 244
ENSMUST00000139443 Hmgb1-006 retained_intron Mus_musculus 0 244
ENSMUST00000085546 Hmgb1-001 protein_coding Mus_musculus 0 244
ENSMUST00000138553 Hmgb1-007 protein_coding Mus_musculus 0 230
ENSMUST00000093196 Hmgb1-002 protein_coding Mus_musculus 0 230
ENSMUST00000110505 Hmgb1-003 protein_coding Mus_musculus 0 230
ENSMUST00000117362 Gm12568-001 processed_pseudogene Mus_musculus 0 222
ENSMUST00000119715 Gm5937-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000118415 Hmgb1-ps3-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000162030 AC098736.2-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000179821 RP24-388H6.4-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000120421 Gm15387-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000084171 Gm5518-201 processed_pseudogene Mus_musculus 0 217
ENSMUST00000119126 Gm9078-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000179479 Hmgb1-ps9-201 processed_pseudogene Mus_musculus 0 211
ENSMUST00000118281 Hmgb1-ps4-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000119503 Hmgb1-ps6-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000117499 Gm12261-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000121058 Hmgb1-ps5-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000116383 Gm14448-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000179326 Gm5473-201 processed_pseudogene Mus_musculus 0 200
ENSMUST00000181542 Hmgb1-ps8-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000119766 Gm12118-001 processed_pseudogene Mus_musculus 0 195
ENSMUST00000121009 Gm14049-001 processed_pseudogene Mus_musculus 0 195
ENSMUST00000120175 Gm11830-001 processed_pseudogene Mus_musculus 0 195
ENSMUST00000120970 Gm15750-001 processed_pseudogene Mus_musculus 2.8026e-45 185
ENSMUST00000186576 RP24-241N3.1-001 processed_pseudogene Mus_musculus 9.80909e-45 183
ENSMUST00000117107 Gm15560-001 processed_pseudogene Mus_musculus 9.80909e-45 183
ENSMUST00000190177 RP24-229N7.1-001 processed_pseudogene Mus_musculus 4.06377e-44 182
ENSMUST00000120168 Gm13902-001 processed_pseudogene Mus_musculus 6.99949e-42 174
ENSMUST00000121222 Gm5396-001 processed_pseudogene Mus_musculus 1e-24 117
ENSMUST00000183926 Gm27254-001 processed_pseudogene Mus_musculus 0.00000000009 71

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