C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507366 CTC-512J14.7-001 ENSG00000184188 9606 - 5:80299678-80302847 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungTestisENST00000507366
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Testis
ENST00000507366 0.017±0.00 0.018±0.00 0.061±0.00 0.020±0.00 0.018±0.00 0.019±0.00 0.016±0.00 0.053±0.00 0.175±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 1033
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 878
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 878
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 867
ENSDART00000141737 actb2-001 protein_coding Danio_rerio 0 859
ENSDART00000055194 actb2-007 protein_coding Danio_rerio 0 859
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 846
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 846
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 839
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 837
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 811
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 723
ENSMUST00000120059 Gm5388-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 680
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 680
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 680
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 680
ENSDART00000055136 actc1b-201 protein_coding Danio_rerio 0 676
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 638
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 638
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 638
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 632
ENSMUST00000118518 Gm12003-001 processed_pseudogene Mus_musculus 0 627
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 604
ENSMUST00000039631 Acta2-201 protein_coding Mus_musculus 0 588
ENSDART00000080664 protein_coding Danio_rerio 0 566
ENSDART00000134020 actb2-003 processed_transcript Danio_rerio 0 556
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 551
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 0 549
ENSDART00000148290 actb2-002 nonsense_mediated_decay Danio_rerio 0 532
ENSDART00000132497 actb2-006 retained_intron Danio_rerio 0 416
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 377
ENSDART00000135971 actb2-005 retained_intron Danio_rerio 0 224
ENSMUST00000089616 Actg1-009 protein_coding Mus_musculus 2e-20 104

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