C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 17087
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184183 Gm17087-002 ENSMUSG00000099104 10090 - 17:8566399-8566869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyPlacentaTestisENSMUST00000184183
Transcript ID Bladder Breast Colon Kidney Placenta Testis
ENSMUST00000184183 0.072±0.00 0.125±0.00 0.340±0.00 0.166±0.06 0.023±0.00 0.059±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0030855 IEA epithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 375
ENSDART00000080664 protein_coding Danio_rerio 0 366
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 353
ENSDART00000055136 actc1b-201 protein_coding Danio_rerio 0 344
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 313
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 307
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 202
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 9.80909e-45 183
ENST00000331789 ACTB-001 protein_coding Homo_sapiens 0 455
ENST00000356920 POTEE-001 protein_coding Homo_sapiens 0 375
ENST00000357462 POTEF-201 protein_coding Homo_sapiens 0 392
ENST00000366683 ACTA1-201 protein_coding Homo_sapiens 0 303
ENST00000366684 ACTA1-001 protein_coding Homo_sapiens 0 320
ENST00000397487 POTEKP-001 unprocessed_pseudogene Homo_sapiens 0 431
ENST00000409602 POTEJ-001 protein_coding Homo_sapiens 0 370
ENST00000409914 POTEF-001 protein_coding Homo_sapiens 0 392
ENST00000417657 LA16c-3G11.7-001 processed_pseudogene Homo_sapiens 0 387
ENST00000418987 RP11-394D2.1-001 processed_pseudogene Homo_sapiens 0 331
ENST00000420887 RP11-259P15.3-001 processed_pseudogene Homo_sapiens 0 289
ENST00000423183 ACTG1P12-001 processed_pseudogene Homo_sapiens 0 294
ENST00000423293 RP11-12M9.4-001 processed_pseudogene Homo_sapiens 0 333
ENST00000432588 ACTB-008 protein_coding Homo_sapiens 0 424
ENST00000436287 ACTBP11-001 processed_pseudogene Homo_sapiens 0 398
ENST00000441772 AC139143.2-001 processed_pseudogene Homo_sapiens 0 248
ENST00000446382 ACTG1P14-001 processed_pseudogene Homo_sapiens 0 375
ENST00000451531 POTEI-001 protein_coding Homo_sapiens 0 381
ENST00000477812 ACTB-007 retained_intron Homo_sapiens 0 407
ENST00000484841 ACTB-005 retained_intron Homo_sapiens 0 455
ENST00000493945 ACTB-004 retained_intron Homo_sapiens 0 455
ENST00000520036 ACTBP6-001 processed_pseudogene Homo_sapiens 0 278
ENST00000570019 RP11-602M11.3-001 processed_pseudogene Homo_sapiens 0 255

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