C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POTE ankyrin domain family, member K, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397487 POTEKP-001 ENSG00000204434 9606 + 2:131591752-131627266 unprocessed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000397487
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000397487 0.048±0.00 0.068±0.00 0.095±0.04 0.011±0.00 0.014±0.00 0.006±0.00 0.040±0.00 0.005±0.00 0.040±0.04 0.007±0.00 0.384±0.31

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 1351
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 1203
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 1203
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 1192
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 1138
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 1122
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 1050
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 1037
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 1029
ENSDART00000055136 actc1b-201 protein_coding Danio_rerio 0 957
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 946
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 937
ENSMUST00000090269 Actc1-001 protein_coding Mus_musculus 0 918
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 913
ENSMUST00000120059 Gm5388-001 processed_pseudogene Mus_musculus 0 911
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 911
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 896
ENSMUST00000039631 Acta2-201 protein_coding Mus_musculus 0 880
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 880
ENSMUST00000184255 Gm17087-001 translated_processed_pseudogene Mus_musculus 0 861
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 848
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 848
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 848
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 848
ENSMUST00000118518 Gm12003-001 processed_pseudogene Mus_musculus 0 802
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 800
ENSDART00000080664 protein_coding Danio_rerio 0 787
ENSDART00000109883 ACTC1 (2 of 2)-002 protein_coding Danio_rerio 0 771
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 0 760
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 737
ENSMUST00000119663 Gm4760-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000128055 Actg1-005 protein_coding Mus_musculus 0 638
ENSMUST00000119420 Gm4918-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000106216 Actb-006 protein_coding Mus_musculus 0 558
ENSMUST00000165629 Actb-008 retained_intron Mus_musculus 0 449
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 448
ENSMUST00000184183 Gm17087-002 protein_coding Mus_musculus 0 431
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 414
ENSMUST00000156343 Actg1-004 retained_intron Mus_musculus 0 381
ENSMUST00000141406 Actg1-007 retained_intron Mus_musculus 0 377
ENSMUST00000165006 Gm17228-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000164765 Actb-005 retained_intron Mus_musculus 0 313
ENSMUST00000163829 Actb-004 protein_coding Mus_musculus 0 213
ENSDART00000155770 ACTC1 (2 of 2)-001 protein_coding Danio_rerio 4.00001e-41 174
ENSMUST00000144868 Actg1-003 retained_intron Mus_musculus 6e-39 167
ENSMUST00000089616 Actg1-009 protein_coding Mus_musculus 1e-26 126

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